Arabidopsis metabolite database

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August undefined, 2024

Web10 dic 2014 · We have constructed and annotated a web-based database of over 280 Arabidopsis genes that have characterized mutants associated with Arabidopsis acyl … WebTargeted LC-MS metabolite analysis focuses on the detection and quantitation of the researcher’s target metabolites. Whilst the word “target analysis” has been used for the analytical measurement to obtain the absolute concentrations evaluated by authentic and/or stable-isotope-labeled standards, over time the phrase came to be also used ...

Genetic dissection of metabolite variation in Arabidopsis seeds ...

WebA database of pre-calculated metabolite response statistics may be interrogated using simple search, cross-experiment meta-analysis or a novel pattern-matching ‘phenocopy … Web29 gen 2015 · Identification of heterotic metabolite QTL in Arabidopsis thaliana RIL and IL populations. Plant J, 59 (2009), pp. 777-788. ... Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics — database and tools update. Nucleic Acids Res, 40 (2012), pp. D1216-D1220. texas road weather

Cells Free Full-Text Metabolic and Transcriptional Stress …

WebThe LIPID MAPS® Gene/Proteome Database (LMPD) is comprised of lipid-related genes and proteins; LMPD contains data for over 8,500 genes and over 12,500 proteins from Homo sapiens, Mus musculus, Rattus norvegicus, Saccharomyces cerevisiae, Caenorhabditis elegans, Escherichia coli, Macaca mulata, Drosophila melanogaster, … Web21 mar 2024 · Measurement(s) gene expression • metabolite Technology Type(s) gene expression detection method • gas chromatography time-of-flight mass spectrometry … WebMetabolite Profiling Data Metabolite Profiling Database for Knock-Out Mutants in Arabidopsis (MeKO) The MeKO database allows evaluation of whether a mutation … texas road wichita ks

Metabolomic Characterization of Knockout Mutants in Arabidopsis ...

Metabolite profiling of Arabidopsis mutants of lower glycolysis ...

Web15 mar 2024 · The Yeast Metabolome Database ( YMDB) is a manually curated database of small molecule metabolites found in or produced by Saccharomyces cerevisiae (also known as Baker’s yeast and Brewer’s yeast). This database covers metabolites described in textbooks, scientific journals, metabolic reconstructions, and other electronic databases. Web17 mar 2024 · The chloroplast acetylation machinery in the model plant Arabidopsis thaliana consists of eight General control non-repressible 5 (GCN5)-related N-acetyltransferase ... (Bienvenut et al. 2024), GNAT1 and GNAT2 show distinct enzymatic properties both as metabolite and protein ... such as METLIN and The Human … texas roadbookWeb9 apr 2024 · Cyclocarya paliurus (Batal) Iljinskaja is mainly used for harvesting leaves as materials for tea production and ingredients for the food industry. As its most important component, the contents of its total or specific flavonoids are supposed to vary at different ploidy levels. In the present study, two ploidy levels of C. paliurus are used to study their … texas road weather conditions

"WebSakurai N, Ara T, Ogata Y et al (2011) KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and … " - Arabidopsis metabolite database

Arabidopsis metabolite database

MINEs: open access databases of computationally predicted …

Web3 apr 2024 · Application of mass spectrometry-based metabolomics enables the detection of genotype-related natural variance in metabolism. Differences in secondary metabolite … Web25 ago 2024 · Numerous compound repositories for metabolite annotation such as PubChem (Wheeler et al. 2008), Chemical Entities of Biological Interest, ChEBI (Degtyarenko et al. 2008), KNApSAcK (Shinbo et al. 2006), LipidBank, and LIPID MAPS (Fahy et al. 2007), Kyoto Encyclopedia of Genes and Genomes, KEGG (Kanehisa et al. …

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Web14 mag 2014 · To make the data set available as an efficient public functional genomics tool for hypothesis generation, we developed the Metabolite Profiling Database for Knock … Web21 dic 2010 · It incorporates GC-MS and LC-MS based metabolite-profiling data dynamically linked to metabolite information from other public metabolomic databases, including HMDB and Knapsack. SoyMetDB includes Arabidopsis metabolomic data for cross-species comparisons and can retrieve information including the expression …

Web27 giu 2024 · In-depth understanding of metabolite-mediated plant-nematode interactions can guide us towards novel nematode management strategies. To improve our understanding of the effects of secondary ... Web21 nov 2016 · Both Agave and Arabidopsis metabolite measurements were taken from ... Merged long reads with BLASTN hits in the NCBI chloroplast database and the un-merged paired end reads were used to create de ...

Web10 apr 2024 · On the basis of a self-established database (MWDB) and a public database concerning metabolite information, the MRM mode of the QQQ mass spectrometer was used for metabolite qualitative and quantitative analysis. The qualitative analysis of metabolites was conducted using the stepwise multiple ion monitoring-enhanced product … Web25 lug 2024 · KEGG COMPOUND is one of the four original databases, together with KEGG PATHWAY, KEGG GENES and KEGG ENZYME, introduced at the start of the KEGG project. Its role has ALways been to enable links from individual molecular data to molecular network data. Chemical compound entries are constituents of KEGG pathway maps and …

Web3 apr 2024 · Here, data of floral secondary metabolite abundance measured in a population of 64 Arabidopsis thaliana (Arabidopsis) natural accessions are presented (Data …

Web6 mar 2024 · As a result of database queries, a series of candidate regulatory genes, including bZIP10, ... LC-MS-based metabolomic approaches and quantitative genetic … texas roadhogWeb25 ago 2014 · Metabolite Profiling Data NSF2010 Metabolomics Allows access to Arabidopsis metabolite profiling data. The Golm Metabolome Database Allows access to mass spectra and retention time index libraries, and metabolite profiling experiments. SpinAssign Performs batch-assignments of NMR peaks. texas road widthWeb13 apr 2024 · Differential metabolite analysis yielded 193 differential metabolites classified into 10 major classes. Among these differential metabolites, 158 were upregulated, and 35 were downregulated. texas road workWeb23 nov 2024 · A comprehensive metabolome and transcriptome analysis of CK-signaling–defective Arabidopsis thaliana histidine-containing phosphotransfer protein ahp2,3,5 and type-B Arabidopsis response regulator arr1,10,12 triple mutants under nonsaline and saline conditions revealed that CK signaling induces a reprogramming of … texas road work mapWeb10 mag 2024 · Uncharacterized biosynthetic genes in plant genomes suggest that plants make a plethora of specialized metabolites. Huang et al. reconstructed three biosynthetic networks from the small mustard plant Arabidopsis thaliana. Promiscuous acyltransferases and dehydrogenases contributed to metabolite diversification. texas road windsorWeb24 nov 2024 · Plant stress memory can provide the benefits of enhanced protection against additional stress exposure. Here, we aimed to explore the responses of recurrent and non-recurrent yeast extract (YE) stresses in Sorbus pohuashanensis suspension cells (SPSCs) at metabolomics and transcriptional levels. Biochemical analyses showed that the cell … texas roadheadWebMueller LA, Zhang P, Rhee SY (2003) AraCyc: a biochemical pathway database for Arabidopsis. Plant Physiol 132:453–460. CrossRef PubMed CAS Google Scholar … texas roadhous east greenwhich